docstrings for module files

CHANGELOG.md

@@ -7,13 +7,9 @@ and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0
 
 ## TODO
 
-- Sorting of bookmarks
-  - Sort by title
-  - Sort by date
-- Logging of actions
 - Add new way of authentication and editing bookmark collections:
   https://github.com/aquatix/digimarks/issues/8 and https://github.com/aquatix/digimarks/issues/9
-- Change adding tags to use the MaterializeCSS tags: https://materializecss.com/chips.html
+- Change adding tags to use ~~the MaterializeCSS tags: https://materializecss.com/chips.html~~ a nice tags lib/styling
 - Do calls to the API endpoint of an existing bookmark when editing properties
   (for example to update tags, title and such, also to already suggest title)
 - Look into compatibility with del.icio.us, so we can make use of existing browser integration
@@ -23,7 +19,14 @@ and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0
 ## [Unreleased]
 
 ### Added
-- Settings through Pydantic Settings
+- Settings now work through Pydantic Settings
+- New UI theme(s) through digui
+- Caching of the bookmarks, tags and more in the browser, for fast filtering and lookups
+- Sorting of bookmarks
+  - Sort by title
+  - Sort by date
+- Logging of actions
+- Recognise when a url already is in the list of known bookmarks and fill in the form with already-known data
 
 ### Changed
 - Moved from Flask to FastAPI

README.rst

@@ -30,7 +30,10 @@ necessary packages:
     git clone https://github.com/aquatix/digimarks.git
     cd digimarks
     mkvirtualenv digimarks # or whatever project you are working on
-    pip install -r requirements.txt
+    # If you just want to run it, no need for development dependencies
+    uv sync --active --no-dev
+    # Otherwise, install everything in the active virtualenv
+    uv sync --active
 
 
 Migrating from version 1

__init__.py

@@ -0,0 +1 @@
+"""Digimarks project."""

migrations/env.py

@@ -1,3 +1,5 @@
+"""Alembic environment file for SQLAlchemy."""
+
 import asyncio
 from logging.config import fileConfig
 
@@ -7,7 +9,7 @@ from sqlalchemy.engine import Connection
 from sqlalchemy.ext.asyncio import async_engine_from_config
 from sqlmodel import SQLModel
 
-from src.digimarks.models import Bookmark, PublicTag, User
+from src.digimarks.models import Bookmark, PublicTag, User  # noqa
 
 # this is the Alembic Config object, which provides
 # access to the values within the .ini file in use.
@@ -48,6 +50,7 @@ def run_migrations_offline() -> None:
         target_metadata=target_metadata,
         literal_binds=True,
         dialect_opts={'paramstyle': 'named'},
+        render_as_batch=True,
     )
 
     with context.begin_transaction():
@@ -55,7 +58,12 @@ def run_migrations_offline() -> None:
 
 
 def do_run_migrations(connection: Connection) -> None:
-    context.configure(connection=connection, target_metadata=target_metadata)
+    """Run the migrations."""
+    context.configure(
+        connection=connection,
+        target_metadata=target_metadata,
+        render_as_batch=True,
+    )
 
     with context.begin_transaction():
         context.run_migrations()

migrations/versions/115bcd2e1a38_initial_migration.py

@@ -1,15 +1,14 @@
-"""Initial migration
+"""Initial migration.
 
 Revision ID: 115bcd2e1a38
-Revises: 
+Revises:
 Create Date: 2025-09-12 16:06:16.479075
-
 """
+
 from typing import Sequence, Union
 
-from alembic import op
 import sqlalchemy as sa
-
+from alembic import op
 
 # revision identifiers, used by Alembic.
 revision: str = '115bcd2e1a38'
@@ -21,38 +20,41 @@ depends_on: Union[str, Sequence[str], None] = None
 def upgrade() -> None:
     """Upgrade schema."""
     # ### commands auto generated by Alembic - please adjust! ###
-    op.create_table('bookmark',
+    op.create_table(
-    sa.Column('id', sa.Integer(), nullable=False),
+        'bookmark',
-    sa.Column('userkey', sa.String(length=255), nullable=False),
+        sa.Column('id', sa.Integer(), nullable=False),
-    sa.Column('title', sa.String(length=255), nullable=False),
+        sa.Column('userkey', sa.String(length=255), nullable=False),
-    sa.Column('url', sa.String(length=255), nullable=False),
+        sa.Column('title', sa.String(length=255), nullable=False),
-    sa.Column('created_date', sa.DateTime(), nullable=False),
+        sa.Column('url', sa.String(length=255), nullable=False),
-    sa.Column('url_hash', sa.String(length=255), nullable=False),
+        sa.Column('created_date', sa.DateTime(), nullable=False),
-    sa.Column('tags', sa.String(length=255), nullable=False),
+        sa.Column('url_hash', sa.String(length=255), nullable=False),
-    sa.Column('http_status', sa.Integer(), nullable=False),
+        sa.Column('tags', sa.String(length=255), nullable=False),
-    sa.Column('modified_date', sa.DateTime(), nullable=True),
+        sa.Column('http_status', sa.Integer(), nullable=False),
-    sa.Column('favicon', sa.String(length=255), nullable=True),
+        sa.Column('modified_date', sa.DateTime(), nullable=True),
-    sa.Column('starred', sa.Boolean(), server_default=sa.text('0'), nullable=True),
+        sa.Column('favicon', sa.String(length=255), nullable=True),
-    sa.Column('deleted_date', sa.DateTime(), server_default=sa.text('(null)'), nullable=True),
+        sa.Column('starred', sa.Boolean(), server_default=sa.text('0'), nullable=True),
-    sa.Column('status', sa.Integer(), server_default=sa.text('0'), nullable=True),
+        sa.Column('deleted_date', sa.DateTime(), server_default=sa.text('(null)'), nullable=True),
-    sa.Column('note', sa.Text(), server_default=sa.text('(null)'), nullable=True),
+        sa.Column('status', sa.Integer(), server_default=sa.text('0'), nullable=True),
-    sa.PrimaryKeyConstraint('id')
+        sa.Column('note', sa.Text(), server_default=sa.text('(null)'), nullable=True),
+        sa.PrimaryKeyConstraint('id'),
     )
-    op.create_table('publictag',
+    op.create_table(
-    sa.Column('id', sa.Integer(), nullable=False),
+        'publictag',
-    sa.Column('tagkey', sa.String(length=255), nullable=False),
+        sa.Column('id', sa.Integer(), nullable=False),
-    sa.Column('userkey', sa.String(length=255), nullable=False),
+        sa.Column('tagkey', sa.String(length=255), nullable=False),
-    sa.Column('tag', sa.String(length=255), nullable=False),
+        sa.Column('userkey', sa.String(length=255), nullable=False),
-    sa.Column('created_date', sa.DateTime(), server_default=sa.text('(null)'), nullable=True),
+        sa.Column('tag', sa.String(length=255), nullable=False),
-    sa.PrimaryKeyConstraint('id')
+        sa.Column('created_date', sa.DateTime(), server_default=sa.text('(null)'), nullable=True),
+        sa.PrimaryKeyConstraint('id'),
     )
-    op.create_table('user',
+    op.create_table(
-    sa.Column('id', sa.Integer(), nullable=False),
+        'user',
-    sa.Column('username', sa.String(length=255), nullable=False),
+        sa.Column('id', sa.Integer(), nullable=False),
-    sa.Column('key', sa.String(length=255), nullable=False),
+        sa.Column('username', sa.String(length=255), nullable=False),
-    sa.Column('created_date', sa.DateTime(), nullable=False),
+        sa.Column('key', sa.String(length=255), nullable=False),
-    sa.Column('theme', sa.String(length=20), server_default=sa.text("'green'"), nullable=True),
+        sa.Column('created_date', sa.DateTime(), nullable=False),
-    sa.PrimaryKeyConstraint('id')
+        sa.Column('theme', sa.String(length=20), server_default=sa.text("'green'"), nullable=True),
+        sa.PrimaryKeyConstraint('id'),
     )
     # ### end Alembic commands ###
 

migrations/versions/a8d8e45f60a1_migrate_to_sqlmodel.py

@@ -3,15 +3,14 @@
 Revision ID: a8d8e45f60a1
 Revises: 115bcd2e1a38
 Create Date: 2025-09-12 16:10:41.378716
-
 """
+
+from datetime import UTC, datetime
 from typing import Sequence, Union
 
-from alembic import op
-from datetime import UTC, datetime
 import sqlalchemy as sa
 import sqlmodel
-
+from alembic import op
 
 # revision identifiers, used by Alembic.
 revision: str = 'a8d8e45f60a1'
@@ -24,72 +23,74 @@ def upgrade() -> None:
     """Upgrade schema."""
     # ### commands auto generated by Alembic - please adjust! ###
     with op.batch_alter_table('bookmark', schema=None) as batch_op:
-        batch_op.alter_column('note',
+        batch_op.alter_column(
-                   existing_type=sa.TEXT(),
+            'note',
-                   type_=sqlmodel.sql.sqltypes.AutoString(),
+            existing_type=sa.TEXT(),
-                   nullable=True,
+            type_=sqlmodel.sql.sqltypes.AutoString(),
-                   existing_server_default=sa.text('(null)'))
+            nullable=True,
-        batch_op.alter_column('starred',
+            existing_server_default=sa.text('(null)'),
-                   existing_type=sa.BOOLEAN(),
+        )
-                   nullable=False,
+        batch_op.alter_column(
-                   existing_server_default=sa.text('0'))
+            'starred', existing_type=sa.BOOLEAN(), nullable=False, existing_server_default=sa.text('0')
-        batch_op.alter_column('modified_date',
+        )
-                   existing_type=sa.DATETIME(),
+        batch_op.alter_column('modified_date', existing_type=sa.DATETIME(), nullable=True)
-                   nullable=True)
+        batch_op.alter_column(
-        batch_op.alter_column('deleted_date',
+            'deleted_date', existing_type=sa.DATETIME(), nullable=True, existing_server_default=sa.text('(null)')
-                   existing_type=sa.DATETIME(),
+        )
-                   nullable=True,
+        batch_op.alter_column(
-                   existing_server_default=sa.text('(null)'))
+            'status', existing_type=sa.INTEGER(), nullable=False, existing_server_default=sa.text('0')
-        batch_op.alter_column('status',
+        )
-                   existing_type=sa.INTEGER(),
-                   nullable=False,
-                   existing_server_default=sa.text('0'))
         batch_op.create_foreign_key('bookmark_user', 'user', ['userkey'], ['key'])
     with op.batch_alter_table('publictag', schema=None) as batch_op:
-        batch_op.alter_column('created_date',
+        batch_op.alter_column(
-                   existing_type=sa.DATETIME(),
+            'created_date',
-                   nullable=True,
+            existing_type=sa.DATETIME(),
-                   existing_server_default=sa.text(str(datetime.now(UTC))))
+            nullable=True,
+            existing_server_default=sa.text(str(datetime.now(UTC))),
+        )
         batch_op.create_foreign_key('publictag_user', 'user', ['userkey'], ['key'])
     with op.batch_alter_table('user', schema=None) as batch_op:
-        batch_op.alter_column('theme',
+        batch_op.alter_column(
-                   existing_type=sa.VARCHAR(length=20),
+            'theme', existing_type=sa.VARCHAR(length=20), nullable=False, existing_server_default=sa.text("'green'")
-                   nullable=False,
+        )
-                   existing_server_default=sa.text("'green'"))
     # ### end Alembic commands ###
 
 
 def downgrade() -> None:
     """Downgrade schema."""
     # ### commands auto generated by Alembic - please adjust! ###
-    op.alter_column('user', 'theme',
+    op.alter_column(
-               existing_type=sa.VARCHAR(length=20),
+        'user', 'theme', existing_type=sa.VARCHAR(length=20), nullable=True, existing_server_default=sa.text("'green'")
-               nullable=True,
+    )
-               existing_server_default=sa.text("'green'"))
     op.drop_constraint(None, 'publictag', type_='foreignkey')
-    op.alter_column('publictag', 'created_date',
+    op.alter_column(
-               existing_type=sa.DATETIME(),
+        'publictag',
-               nullable=True,
+        'created_date',
-               existing_server_default=sa.text('(null)'))
+        existing_type=sa.DATETIME(),
+        nullable=True,
+        existing_server_default=sa.text('(null)'),
+    )
     op.drop_constraint(None, 'bookmark', type_='foreignkey')
-    op.alter_column('bookmark', 'status',
+    op.alter_column(
-               existing_type=sa.INTEGER(),
+        'bookmark', 'status', existing_type=sa.INTEGER(), nullable=True, existing_server_default=sa.text('0')
-               nullable=True,
+    )
-               existing_server_default=sa.text('0'))
+    op.alter_column(
-    op.alter_column('bookmark', 'deleted_date',
+        'bookmark',
-               existing_type=sa.DATETIME(),
+        'deleted_date',
-               nullable=True,
+        existing_type=sa.DATETIME(),
-               existing_server_default=sa.text('(null)'))
+        nullable=True,
-    op.alter_column('bookmark', 'modified_date',
+        existing_server_default=sa.text('(null)'),
-               existing_type=sa.DATETIME(),
+    )
-               nullable=True)
+    op.alter_column('bookmark', 'modified_date', existing_type=sa.DATETIME(), nullable=True)
-    op.alter_column('bookmark', 'starred',
+    op.alter_column(
-               existing_type=sa.BOOLEAN(),
+        'bookmark', 'starred', existing_type=sa.BOOLEAN(), nullable=True, existing_server_default=sa.text('0')
-               nullable=True,
+    )
-               existing_server_default=sa.text('0'))
+    op.alter_column(
-    op.alter_column('bookmark', 'note',
+        'bookmark',
-               existing_type=sqlmodel.sql.sqltypes.AutoString(),
+        'note',
-               type_=sa.TEXT(),
+        existing_type=sqlmodel.sql.sqltypes.AutoString(),
-               nullable=True,
+        type_=sa.TEXT(),
-               existing_server_default=sa.text('(null)'))
+        nullable=True,
+        existing_server_default=sa.text('(null)'),
+    )
     # ### end Alembic commands ###

migrations/versions/b8cbc6957df5_renamed_keys.py

@@ -0,0 +1,50 @@
+"""Renamed keys.
+
+Revision ID: b8cbc6957df5
+Revises: a8d8e45f60a1
+Create Date: 2025-09-12 22:26:38.684120
+"""
+
+from typing import Sequence, Union
+
+from alembic import op
+
+# revision identifiers, used by Alembic.
+revision: str = 'b8cbc6957df5'
+down_revision: Union[str, Sequence[str], None] = 'a8d8e45f60a1'
+branch_labels: Union[str, Sequence[str], None] = None
+depends_on: Union[str, Sequence[str], None] = None
+
+
+def upgrade() -> None:
+    """Upgrade schema."""
+    # ### commands auto generated by Alembic - please adjust! ###
+    with op.batch_alter_table('bookmark', schema=None) as batch_op:
+        batch_op.drop_constraint(batch_op.f('bookmark_user'), type_='foreignkey')
+        batch_op.alter_column('userkey', new_column_name='user_key')
+        batch_op.create_foreign_key('bookmark_user', 'user', ['user_key'], ['key'])
+
+    with op.batch_alter_table('publictag', schema=None) as batch_op:
+        batch_op.drop_constraint(batch_op.f('publictag_user'), type_='foreignkey')
+        batch_op.alter_column('userkey', new_column_name='user_key')
+        batch_op.alter_column('tagkey', new_column_name='tag_key')
+        batch_op.create_foreign_key('publictag_user', 'user', ['user_key'], ['key'])
+
+    # ### end Alembic commands ###
+
+
+def downgrade() -> None:
+    """Downgrade schema."""
+    # ### commands auto generated by Alembic - please adjust! ###
+    with op.batch_alter_table('publictag', schema=None) as batch_op:
+        batch_op.drop_constraint(batch_op.f('publictag_user'), type_='foreignkey')
+        batch_op.alter_column('user_key', new_column_name='userkey')
+        batch_op.alter_column('tag_key', new_column_name='tagkey')
+        batch_op.create_foreign_key('publictag_user', 'user', ['userkey'], ['key'])
+
+    with op.batch_alter_table('bookmark', schema=None) as batch_op:
+        batch_op.drop_constraint(batch_op.f('bookmark_user'), type_='foreignkey')
+        batch_op.alter_column('user_key', new_column_name='userkey')
+        batch_op.create_foreign_key('bookmark_user', 'user', ['userkey'], ['key'])
+
+    # ### end Alembic commands ###

pyproject.toml

@@ -6,25 +6,51 @@ build-backend = "setuptools.build_meta"
 name = "digimarks"
 version = "1.1.99"
 authors = [
-    {name = "Michiel Scholten", email = "michiel@diginaut.net"},
+    { name = "Michiel Scholten", email = "michiel@diginaut.net" },
 ]
-description='Simple bookmarking service, using a SQLite database to store bookmarks, supporting tags, automatic title fetching and REST API calls.'
+description = 'Simple bookmarking service, using a SQLite database to store bookmarks, supporting tags, automatic title fetching and REST API calls.'
 readme = "README.rst"
-requires-python = ">=3.7"
+requires-python = ">=3.10"
 keywords = ["bookmarks", "api"]
-license = {text = "Apache"}
+license = { text = "Apache" }
 classifiers = [
     "Framework :: FastAPI",
     "Programming Language :: Python :: 3",
     "License :: OSI Approved :: Apache Software License",
 ]
 dependencies = [
-    "importlib-metadata; python_version<'3.8'",
     "fastapi[all]",
+    "sqlmodel",
+    "alembic",
+    "aiosqlite",
     "pydantic>2.0",
-    "requests",
+    "httpx",
-    "bs4",
+    "beautifulsoup4",
-    "feedgen"
+    "extract_favicon",
+    "feedgen",
+]
+
+[dependency-groups]
+dev = [
+  {include-group = "lint"},
+  {include-group = "pub"},
+  {include-group = "test"}
+]
+test = [
+    "pytest>=7.0.0",
+    "pytest-cov>=4.0.0",
+]
+lint = [
+    "ruff>=0.1.0",
+    "mypy>=1.0.0",
+]
+# Publishing on PyPI
+pub = [
+    "build",
+    "twine"
+]
+server = [
+    "gunicorn>=23.0.0",
 ]
 # dynamic = ["version"]
 

requirements-dev.txt

@@ -1,223 +1,11 @@
-#
+-r requirements.txt
-# This file is autogenerated by pip-compile with Python 3.10
+
-# by the following command:
+# Linting and fixing, including isort
-#
+ruff
-#    pip-compile requirements-dev.in
+
-#
+# Test suite
-annotated-types==0.5.0
+pytest
-    # via pydantic
+
-anyio==3.7.1
+# Publishing on PyPI
-    # via
+build
-    #   httpcore
+twine
-    #   starlette
-    #   watchfiles
-astroid==2.15.6
-    # via pylint
-beautifulsoup4==4.12.2
-    # via bs4
-black==23.7.0
-    # via -r requirements-dev.in
-bleach==6.0.0
-    # via readme-renderer
-bs4==0.0.1
-    # via -r requirements.in
-build==0.10.0
-    # via -r requirements-dev.in
-certifi==2023.7.22
-    # via
-    #   httpcore
-    #   httpx
-    #   requests
-cffi==1.15.1
-    # via cryptography
-charset-normalizer==3.2.0
-    # via requests
-click==8.1.6
-    # via
-    #   black
-    #   uvicorn
-cryptography==41.0.2
-    # via secretstorage
-dill==0.3.7
-    # via pylint
-dnspython==2.4.1
-    # via email-validator
-docutils==0.20.1
-    # via readme-renderer
-email-validator==2.0.0.post2
-    # via fastapi
-exceptiongroup==1.1.2
-    # via anyio
-fastapi[all]==0.100.1
-    # via -r requirements.in
-feedgen==0.9.0
-    # via -r requirements.in
-greenlet==2.0.2
-    # via sqlalchemy
-h11==0.14.0
-    # via
-    #   httpcore
-    #   uvicorn
-httpcore==0.17.3
-    # via httpx
-httptools==0.6.0
-    # via uvicorn
-httpx==0.24.1
-    # via fastapi
-idna==3.4
-    # via
-    #   anyio
-    #   email-validator
-    #   httpx
-    #   requests
-importlib-metadata==6.8.0
-    # via
-    #   keyring
-    #   twine
-isort==5.12.0
-    # via pylint
-itsdangerous==2.1.2
-    # via fastapi
-jaraco-classes==3.3.0
-    # via keyring
-jeepney==0.8.0
-    # via
-    #   keyring
-    #   secretstorage
-jinja2==3.1.2
-    # via fastapi
-keyring==24.2.0
-    # via twine
-lazy-object-proxy==1.9.0
-    # via astroid
-lxml==4.9.3
-    # via feedgen
-markdown-it-py==3.0.0
-    # via rich
-markupsafe==2.1.3
-    # via jinja2
-mccabe==0.7.0
-    # via pylint
-mdurl==0.1.2
-    # via markdown-it-py
-more-itertools==10.0.0
-    # via jaraco-classes
-mypy-extensions==1.0.0
-    # via black
-orjson==3.9.2
-    # via fastapi
-packaging==23.1
-    # via
-    #   black
-    #   build
-pathspec==0.11.2
-    # via black
-pkginfo==1.9.6
-    # via twine
-platformdirs==3.10.0
-    # via
-    #   black
-    #   pylint
-pycparser==2.21
-    # via cffi
-pydantic==2.1.1
-    # via
-    #   fastapi
-    #   pydantic-extra-types
-    #   pydantic-settings
-pydantic-core==2.4.0
-    # via pydantic
-pydantic-extra-types==2.0.0
-    # via fastapi
-pydantic-settings==2.0.2
-    # via fastapi
-pygments==2.15.1
-    # via
-    #   readme-renderer
-    #   rich
-pylint==2.17.5
-    # via -r requirements-dev.in
-pyproject-hooks==1.0.0
-    # via build
-python-dateutil==2.8.2
-    # via feedgen
-python-dotenv==1.0.0
-    # via
-    #   pydantic-settings
-    #   uvicorn
-python-multipart==0.0.6
-    # via fastapi
-pyyaml==6.0.1
-    # via
-    #   fastapi
-    #   uvicorn
-readme-renderer==40.0
-    # via twine
-requests==2.31.0
-    # via
-    #   -r requirements.in
-    #   requests-toolbelt
-    #   twine
-requests-toolbelt==1.0.0
-    # via twine
-rfc3986==2.0.0
-    # via twine
-rich==13.5.0
-    # via twine
-ruff==0.0.280
-    # via -r requirements-dev.in
-secretstorage==3.3.3
-    # via keyring
-six==1.16.0
-    # via
-    #   bleach
-    #   python-dateutil
-sniffio==1.3.0
-    # via
-    #   anyio
-    #   httpcore
-    #   httpx
-soupsieve==2.4.1
-    # via beautifulsoup4
-sqlalchemy==2.0.19
-    # via -r requirements.in
-starlette==0.27.0
-    # via fastapi
-tomli==2.0.1
-    # via
-    #   black
-    #   build
-    #   pylint
-    #   pyproject-hooks
-tomlkit==0.12.1
-    # via pylint
-twine==4.0.2
-    # via -r requirements-dev.in
-typing-extensions==4.7.1
-    # via
-    #   astroid
-    #   fastapi
-    #   pydantic
-    #   pydantic-core
-    #   sqlalchemy
-    #   uvicorn
-ujson==5.8.0
-    # via fastapi
-urllib3==2.0.4
-    # via
-    #   requests
-    #   twine
-uvicorn[standard]==0.23.1
-    # via fastapi
-uvloop==0.17.0
-    # via uvicorn
-watchfiles==0.19.0
-    # via uvicorn
-webencodings==0.5.1
-    # via bleach
-websockets==11.0.3
-    # via uvicorn
-wrapt==1.15.0
-    # via astroid
-zipp==3.16.2
-    # via importlib-metadata

requirements.in

@@ -1,9 +1,15 @@
 # Core application
 fastapi[all]
 sqlmodel
+sqlalchemy
+pydantic
+pydantic_settings
 alembic
 aiosqlite
 
+# Fetch external resources
+httpx
+
 # Fetch title etc from links
 beautifulsoup4
 

requirements.txt

@@ -1,121 +1,20 @@
-#
+# Core application
-# This file is autogenerated by pip-compile with Python 3.10
+fastapi[all]
-# by the following command:
+sqlmodel
-#
+sqlalchemy
-#    pip-compile requirements.in
+pydantic
-#
+pydantic_settings
-annotated-types==0.5.0
+alembic
-    # via pydantic
+aiosqlite
-anyio==3.7.1
+
-    # via
+# Fetch external resources
-    #   httpcore
+httpx
-    #   starlette
+
-    #   watchfiles
+# Fetch title etc from links
-beautifulsoup4==4.12.2
+beautifulsoup4
-    # via bs4
+
-bs4==0.0.1
+# Fetch favicons
-    # via -r requirements.in
+extract_favicon
-certifi==2023.7.22
+
-    # via
+# Generate (atom) feeds for tags and such
-    #   httpcore
+feedgen
-    #   httpx
-    #   requests
-charset-normalizer==3.2.0
-    # via requests
-click==8.1.6
-    # via uvicorn
-dnspython==2.4.1
-    # via email-validator
-email-validator==2.0.0.post2
-    # via fastapi
-exceptiongroup==1.1.2
-    # via anyio
-fastapi[all]==0.100.1
-    # via -r requirements.in
-feedgen==0.9.0
-    # via -r requirements.in
-greenlet==2.0.2
-    # via sqlalchemy
-h11==0.14.0
-    # via
-    #   httpcore
-    #   uvicorn
-httpcore==0.17.3
-    # via httpx
-httptools==0.6.0
-    # via uvicorn
-httpx==0.24.1
-    # via fastapi
-idna==3.4
-    # via
-    #   anyio
-    #   email-validator
-    #   httpx
-    #   requests
-itsdangerous==2.1.2
-    # via fastapi
-jinja2==3.1.2
-    # via fastapi
-lxml==4.9.3
-    # via feedgen
-markupsafe==2.1.3
-    # via jinja2
-orjson==3.9.2
-    # via fastapi
-pydantic==2.1.1
-    # via
-    #   fastapi
-    #   pydantic-extra-types
-    #   pydantic-settings
-pydantic-core==2.4.0
-    # via pydantic
-pydantic-extra-types==2.0.0
-    # via fastapi
-pydantic-settings==2.0.2
-    # via fastapi
-python-dateutil==2.8.2
-    # via feedgen
-python-dotenv==1.0.0
-    # via
-    #   pydantic-settings
-    #   uvicorn
-python-multipart==0.0.6
-    # via fastapi
-pyyaml==6.0.1
-    # via
-    #   fastapi
-    #   uvicorn
-requests==2.31.0
-    # via -r requirements.in
-six==1.16.0
-    # via python-dateutil
-sniffio==1.3.0
-    # via
-    #   anyio
-    #   httpcore
-    #   httpx
-soupsieve==2.4.1
-    # via beautifulsoup4
-sqlalchemy==2.0.19
-    # via -r requirements.in
-starlette==0.27.0
-    # via fastapi
-typing-extensions==4.7.1
-    # via
-    #   fastapi
-    #   pydantic
-    #   pydantic-core
-    #   sqlalchemy
-    #   uvicorn
-ujson==5.8.0
-    # via fastapi
-urllib3==2.0.4
-    # via requests
-uvicorn[standard]==0.23.1
-    # via fastapi
-uvloop==0.17.0
-    # via uvicorn
-watchfiles==0.19.0
-    # via uvicorn
-websockets==11.0.3
-    # via uvicorn

src/__init__.py

@@ -0,0 +1 @@
+"""digimarks main module."""

src/digimarks/__init__.py

@@ -0,0 +1,3 @@
+"""Top-level package for Digimarks."""
+
+__author__ = """Michiel Scholten"""

src/digimarks/bookmarks_service.py

@@ -0,0 +1,214 @@
+"""Bookmark helper functions, like content scrapers, favicon extractor, updater functions."""
+
+import logging
+from collections.abc import Sequence
+from datetime import UTC, datetime
+from typing import Annotated
+from urllib.parse import urlparse, urlunparse
+
+import bs4
+import httpx
+from extract_favicon import from_html
+from fastapi import Query, Request
+from pydantic import AnyUrl
+from sqlmodel import select
+
+from digimarks import tags_service, utils
+from digimarks.exceptions import BookmarkNotFound
+from digimarks.models import Bookmark, Visibility
+
+DIGIMARKS_USER_AGENT = 'digimarks/2.0.0-dev'
+
+logger = logging.getLogger('digimarks')
+
+
+def get_favicon(html_content: str, root_url: str) -> str:
+    """Fetch the favicon from `html_content` using `root_url`."""
+    favicons = from_html(html_content, root_url=root_url, include_fallbacks=True)
+    for favicon in favicons:
+        print(favicon.url, favicon.width, favicon.height)
+    # TODO: save the preferred image to file and return
+
+
+async def set_information_from_source(bookmark: Bookmark, request: Request) -> Bookmark:
+    """Request the title by requesting the source url."""
+    logger.info('Extracting information from url %s', bookmark.url)
+    try:
+        result = await request.app.requests_client.get(bookmark.url, headers={'User-Agent': DIGIMARKS_USER_AGENT})
+        bookmark.http_status = result.status_code
+    except httpx.HTTPError as err:
+        # For example, "MissingSchema: Invalid URL 'abc': No schema supplied. Perhaps you meant http://abc?"
+        logger.error('Exception when trying to retrieve title for %s. Error: %s', bookmark.url, str(err))
+        bookmark.http_status = 404
+        bookmark.title = ''
+        return bookmark
+    if bookmark.http_status == 200 or bookmark.http_status == 202:
+        html = bs4.BeautifulSoup(result.text, 'html.parser')
+        try:
+            bookmark.title = html.title.text.strip()
+        except AttributeError:
+            bookmark.title = ''
+
+        url_parts = urlparse(str(bookmark.url))
+        root_url = url_parts.scheme + '://' + url_parts.netloc
+        favicon = get_favicon(result.text, root_url)
+        # filename = os.path.join(settings.media_dir, 'favicons/', domain + file_extension)
+        # with open(filename, 'wb') as out_file:
+        #     shutil.copyfileobj(response.raw, out_file)
+
+    # Extraction was successful
+    logger.info('Extracting information was successful')
+    return bookmark
+
+
+def strip_url_params(url: str) -> str:
+    """Strip URL params from URL.
+
+    :param url: URL to strip URL params from.
+    :return: clean URL
+    :rtype: str
+    """
+    parsed = urlparse(url)
+    return urlunparse((parsed.scheme, parsed.netloc, parsed.path, parsed.params, '', parsed.fragment))
+
+
+def update_bookmark_with_info(bookmark: Bookmark, request: Request, strip_params: bool = False):
+    """Automatically update title, favicon, etc."""
+    if not bookmark.title:
+        # Title was empty, automatically fetch it from the url, will also update the status code
+        set_information_from_source(bookmark, request)
+
+    if strip_params:
+        # Strip URL parameters, e.g., tracking params
+        bookmark.url = AnyUrl(strip_url_params(str(bookmark.url)))
+
+    # Sort and deduplicate tags
+    tags_service.set_tags(bookmark, bookmark.tags)
+
+
+async def list_bookmarks_for_user(
+    session,
+    user_key: str,
+    offset: int = 0,
+    limit: Annotated[int, Query(le=10000)] = 100,
+) -> Sequence[Bookmark]:
+    """List all bookmarks in the database. By default, 100 items are returned."""
+    result = await session.exec(
+        select(Bookmark)
+        .where(Bookmark.user_key == user_key, Bookmark.status != Visibility.DELETED)
+        .offset(offset)
+        .limit(limit)
+    )
+    bookmarks = result.all()
+    return bookmarks
+
+
+async def get_bookmark_for_user_with_url_hash(session, user_key: str, url_hash: str) -> Bookmark:
+    """Get a bookmark from the database by its URL hash."""
+    result = await session.exec(
+        select(Bookmark).where(
+            Bookmark.user_key == user_key, Bookmark.url_hash == url_hash, Bookmark.status != Visibility.DELETED
+        )
+    )
+    if not result.first():
+        raise BookmarkNotFound(f'url_hash: {url_hash}')
+    return result.first()
+
+
+async def autocomplete_bookmark(
+    session,
+    request: Request,
+    user_key: str,
+    bookmark: Bookmark,
+    strip_params: bool = False,
+):
+    """Autofill some fields for this (new) bookmark for user `user_key`."""
+    bookmark.user_key = user_key
+
+    # Auto-fill title, fix tags etc.
+    update_bookmark_with_info(bookmark, request, strip_params)
+
+    url_hash = utils.generate_hash(str(bookmark.url))
+    result = await session.exec(
+        select(Bookmark).where(
+            Bookmark.user_key == user_key, Bookmark.url_hash == url_hash, Bookmark.status != Visibility.DELETED
+        )
+    )
+    bookmark_db = result.first()
+    if bookmark_db:
+        # Bookmark with this URL already exists, provide the hash so the frontend can look it up and the user can
+        # merge them if so wanted
+        bookmark.url_hash = url_hash
+
+    return bookmark
+
+
+async def add_bookmark(
+    session,
+    request: Request,
+    user_key: str,
+    bookmark: Bookmark,
+    strip_params: bool = False,
+):
+    """Add new bookmark for user `user_key`."""
+    bookmark.user_key = user_key
+
+    # Auto-fill title, fix tags etc.
+    update_bookmark_with_info(bookmark, request, strip_params)
+    bookmark.url_hash = utils.generate_hash(str(bookmark.url))
+    logger.info('Adding bookmark %s for user %s', bookmark.url_hash, user_key)
+
+    session.add(bookmark)
+    await session.commit()
+    await session.refresh(bookmark)
+    return bookmark
+
+
+async def update_bookmark(
+    session,
+    request: Request,
+    user_key: str,
+    bookmark: Bookmark,
+    url_hash: str,
+    strip_params: bool = False,
+):
+    """Update existing bookmark `bookmark_key` for user `user_key`."""
+    result = await session.exec(
+        select(Bookmark).where(
+            Bookmark.user_key == user_key, Bookmark.url_hash == url_hash, Bookmark.status != Visibility.DELETED
+        )
+    )
+    bookmark_db = result.first()
+    if not bookmark_db:
+        raise BookmarkNotFound(message='Bookmark with hash {url_hash} not found')
+
+    bookmark.modified_date = datetime.now(UTC)
+
+    # 'patch' endpoint, which means that you can send only the data that you want to update, leaving the rest intact
+    bookmark_data = bookmark.model_dump(exclude_unset=True)
+    # Merge the changed fields into the existing object
+    bookmark_db.sqlmodel_update(bookmark_data)
+
+    # Autofill title, fix tags, etc. where (still) needed
+    update_bookmark_with_info(bookmark, request, strip_params)
+
+    session.add(bookmark_db)
+    await session.commit()
+    await session.refresh(bookmark_db)
+    return bookmark_db
+
+
+async def delete_bookmark(
+    session,
+    user_key: str,
+    url_hash: str,
+):
+    """(Soft)Delete bookmark `bookmark_key` for user `user_key`."""
+    result = await session.get(Bookmark, {'url_hash': url_hash, 'user_key': user_key})
+    bookmark = result
+    if not bookmark:
+        raise BookmarkNotFound(message='Bookmark with hash {url_hash} not found')
+    bookmark.deleted_date = datetime.now(UTC)
+    bookmark.status = Visibility.DELETED
+    session.add(bookmark)
+    await session.commit()

src/digimarks/exceptions.py

@@ -0,0 +1,25 @@
+"""Exceptions that could be encountered managing digimarks."""
+
+
+class BookmarkNotFound(Exception):
+    """A bookmark was not found."""
+
+    def __init__(self, message: str ='Bookmark not found'):
+        """Initialise the exception.
+
+        :param str message: The message for the exception
+        """
+        super().__init__(message)
+        self.message: str = message
+
+
+class BookmarkAlreadyExists(Exception):
+    """A bookmark already exists for this URL and this user."""
+
+    def __init__(self, message: str ='Bookmark already exists'):
+        """Initialise the exception.
+
+        :param str message: The message for the exception
+        """
+        super().__init__(message)
+        self.message: str = message

src/digimarks/main.py

@@ -1,32 +1,28 @@
 """digimarks main module."""
 
-import binascii
-import hashlib
 import logging
-import os
+from collections.abc import Sequence
 from contextlib import asynccontextmanager
 from datetime import UTC, datetime
-from typing import Annotated, Sequence, Type
+from typing import Annotated
-from urllib.parse import urlparse, urlunparse
 
-import bs4
 import httpx
-from extract_favicon import from_html
 from fastapi import Depends, FastAPI, HTTPException, Query, Request
 from fastapi.middleware.cors import CORSMiddleware
 from fastapi.responses import HTMLResponse
 from fastapi.staticfiles import StaticFiles
 from fastapi.templating import Jinja2Templates
-from pydantic import AnyUrl, DirectoryPath, FilePath
+from pydantic import DirectoryPath, FilePath
 from pydantic_settings import BaseSettings
 from sqlalchemy.ext.asyncio import create_async_engine
 from sqlalchemy.orm import sessionmaker
 from sqlmodel import desc, select
 from sqlmodel.ext.asyncio.session import AsyncSession
 
-from src.digimarks.models import DEFAULT_THEME, Bookmark, User, Visibility
+from digimarks import bookmarks_service, tags_service
+from digimarks.exceptions import BookmarkNotFound
+from digimarks.models import DEFAULT_THEME, Bookmark, User, Visibility
 
-DIGIMARKS_USER_AGENT = 'digimarks/2.0.0-dev'
 DIGIMARKS_VERSION = '2.0.0a1'
 
 
@@ -38,8 +34,10 @@ class Settings(BaseSettings):
     favicons_dir: DirectoryPath
 
     # inside the codebase
-    static_dir: DirectoryPath = 'static'
+    # static_dir: DirectoryPath = Path('digimarks/static')
-    template_dir: DirectoryPath = 'templates'
+    # template_dir: DirectoryPath = Path('digimarks/templates')
+    static_dir: DirectoryPath = 'digimarks/static'
+    template_dir: DirectoryPath = 'digimarks/templates'
 
     media_url: str = '/static/'
 
@@ -77,6 +75,12 @@ app.mount('/static', StaticFiles(directory=settings.static_dir), name='static')
 app.mount('/content/favicons', StaticFiles(directory=settings.favicons_dir), name='favicons')
 templates = Jinja2Templates(directory=settings.template_dir)
 
+# Set up logging
+logging.basicConfig(
+    level=logging.INFO,
+    format='%(asctime)s - %(name)s - %(levelname)s - %(message)s',
+    datefmt='%Y-%m-%d %H:%M:%S',
+)
 logger = logging.getLogger('digimarks')
 if settings.debug:
     logger.setLevel(logging.DEBUG)
@@ -91,61 +95,6 @@ app.add_middleware(
 )
 
 
-def i_filter_false(predicate, iterable):
-    """Filter an iterable if predicate returns True.
-
-    i_filter_false(lambda x: x%2, range(10)) --> 0 2 4 6 8
-    """
-    if predicate is None:
-        predicate = bool
-    for x in iterable:
-        if not predicate(x):
-            yield x
-
-
-def unique_ever_seen(iterable, key=None):
-    """List unique elements, preserving order. Remember all elements ever seen.
-
-    unique_ever_seen('AAAABBBCCDAABBB') --> A B C D
-    unique_ever_seen('ABBCcAD', str.lower) --> A B C D
-    """
-    seen = set()
-    seen_add = seen.add
-    if key is None:
-        for element in i_filter_false(seen.__contains__, iterable):
-            seen_add(element)
-            yield element
-    else:
-        for element in iterable:
-            k = key(element)
-            if k not in seen:
-                seen_add(k)
-                yield element
-
-
-def clean_tags(tags_list: list) -> list:
-    """Generate a unique list of the tags.
-
-    :param list tags_list: List with all tags
-    :return: deduplicated list of the tags, without leading or trailing whitespace
-    :rtype: list
-    """
-    tags_res = [x.strip() for x in tags_list]
-    tags_res = list(unique_ever_seen(tags_res))
-    tags_res.sort()
-    if tags_res and tags_res[0] == '':
-        del tags_res[0]
-    return tags_res
-
-
-def list_tags_for_bookmarks(bookmarks: list) -> list:
-    """Generate a unique list of the tags from the list of bookmarks."""
-    tags = []
-    for bookmark in bookmarks:
-        tags += bookmark.tags_list
-    return clean_tags(tags)
-
-
 def file_type(filename: str) -> str:
     """Try to determine the file type for the file in `filename`.
 
@@ -165,95 +114,11 @@ def file_type(filename: str) -> str:
     return 'no match'
 
 
-def generate_hash(input_text: str) -> str:
-    """Generate a hash from string `input`, e.g., for a URL."""
-    return hashlib.md5(input_text.encode('utf-8')).hexdigest()
-
-
-def generate_key() -> str:
-    """Generate a key to be used for a user or tag."""
-    return str(binascii.hexlify(os.urandom(24)))
-
-
-def get_favicon(html_content: str, root_url: str) -> str:
-    """Fetch the favicon from `html_content` using `root_url`."""
-    favicons = from_html(html_content, root_url=root_url, include_fallbacks=True)
-    for favicon in favicons:
-        print(favicon.url, favicon.width, favicon.height)
-    # TODO: save the preferred image to file and return
-
-
-async def set_information_from_source(bookmark: Bookmark, request: Request) -> Bookmark:
-    """Request the title by requesting the source url."""
-    logger.info('Extracting information from url %s', bookmark.url)
-    try:
-        result = await request.app.requests_client.get(bookmark.url, headers={'User-Agent': DIGIMARKS_USER_AGENT})
-        bookmark.http_status = result.status_code
-    except httpx.HTTPError as err:
-        # For example, 'MissingSchema: Invalid URL 'abc': No schema supplied. Perhaps you meant http://abc?'
-        logger.error('Exception when trying to retrieve title for %s. Error: %s', bookmark.url, str(err))
-        bookmark.http_status = 404
-        bookmark.title = ''
-        return bookmark
-    if bookmark.http_status == 200 or bookmark.http_status == 202:
-        html = bs4.BeautifulSoup(result.text, 'html.parser')
-        try:
-            bookmark.title = html.title.text.strip()
-        except AttributeError:
-            bookmark.title = ''
-
-        url_parts = urlparse(str(bookmark.url))
-        root_url = url_parts.scheme + '://' + url_parts.netloc
-        favicon = get_favicon(result.text, root_url)
-        # filename = os.path.join(settings.media_dir, 'favicons/', domain + file_extension)
-        # with open(filename, 'wb') as out_file:
-        #     shutil.copyfileobj(response.raw, out_file)
-
-    # Extraction was successful
-    logger.info('Extracting information was successful')
-    return bookmark
-
-
-def set_tags(bookmark: Bookmark, new_tags: str) -> None:
-    """Set tags from `tags`, strip and sort them.
-
-    :param Bookmark bookmark: Bookmark to modify
-    :param str new_tags: New tags to sort and set.
-    """
-    tags_split = new_tags.split(',')
-    tags_clean = clean_tags(tags_split)
-    bookmark.tags = ','.join(tags_clean)
-
-
-def strip_url_params(url: str) -> str:
-    """Strip URL params from URL.
-
-    :param url: URL to strip URL params from.
-    :return: clean URL
-    :rtype: str
-    """
-    parsed = urlparse(url)
-    return urlunparse((parsed.scheme, parsed.netloc, parsed.path, parsed.params, '', parsed.fragment))
-
-
-def update_bookmark_with_info(bookmark: Bookmark, request: Request, strip_params: bool = False):
-    """Automatically update title, favicon, etc."""
-    if not bookmark.title:
-        # Title was empty, automatically fetch it from the url, will also update the status code
-        set_information_from_source(bookmark, request)
-
-    if strip_params:
-        # Strip URL parameters, e.g., tracking params
-        bookmark.url = AnyUrl(strip_url_params(str(bookmark.url)))
-
-    # Sort and deduplicate tags
-    set_tags(bookmark, bookmark.tags)
-
-
 @app.get('/', response_class=HTMLResponse)
 @app.head('/', response_class=HTMLResponse)
 def index(request: Request):
     """Homepage, point visitors to project page."""
+    logger.info('Root page requested')
     return templates.TemplateResponse(
         request=request,
         name='index.html',
@@ -262,13 +127,17 @@ def index(request: Request):
 
 
 @app.get('/api/v1/admin/{system_key}/users/{user_id}', response_model=User)
-async def get_user(session: SessionDep, system_key: str, user_id: int) -> Type[User]:
+async def get_user(session: SessionDep, system_key: str, user_id: int) -> type[User]:
     """Show user information."""
+    logger.info('User %d requested', user_id)
     if system_key != settings.system_key:
+        logger.error('User %s requested but incorrect system key %s provided', user_id, system_key)
         raise HTTPException(status_code=404)
 
-    user = session.get(User, user_id)
+    result = await session.get(User, user_id)
+    user = result
     if not user:
+        logger.error('User %s not found', user_id)
         raise HTTPException(status_code=404, detail='User not found')
     return user
 
@@ -290,11 +159,13 @@ async def list_users(
     :return: list of users in the system
     :rtype: list[User]
     """
+    logger.info('User listing requested')
     if system_key != settings.system_key:
+        logger.error('User listing requested but incorrect system key %s provided', system_key)
         raise HTTPException(status_code=404)
 
-    users = session.exec(select(User).offset(offset).limit(limit)).all()
+    result = await session.exec(select(User).offset(offset).limit(limit))
-    return users
+    return result.all()
 
 
 @app.get('/api/v1/{user_key}/bookmarks/')
@@ -303,16 +174,10 @@ async def list_bookmarks(
     user_key: str,
     offset: int = 0,
     limit: Annotated[int, Query(le=10000)] = 100,
-) -> list[Bookmark]:
+) -> Sequence[Bookmark]:
-    """List all bookmarks in the database. By default 100 items are returned."""
+    """List all bookmarks in the database. By default, 100 items are returned."""
-    result = await session.exec(
+    logger.info('List bookmarks for user %s with offset %d, limit %d', user_key, offset, limit)
-        select(Bookmark)
+    return await bookmarks_service.list_bookmarks_for_user(session, user_key, offset, limit)
-        .where(Bookmark.userkey == user_key, Bookmark.status != Visibility.DELETED)
-        .offset(offset)
-        .limit(limit)
-    )
-    bookmarks = result.all()
-    return bookmarks
 
 
 @app.get('/api/v1/{user_key}/bookmarks/{url_hash}')
@@ -322,14 +187,12 @@ async def get_bookmark(
     url_hash: str,
 ) -> Bookmark:
     """Show bookmark details."""
-    result = await session.exec(
+    logger.info('Bookmark details for user %s with url_hash %s', user_key, url_hash)
-        select(Bookmark).where(
+    try:
-            Bookmark.userkey == user_key, Bookmark.url_hash == url_hash, Bookmark.status != Visibility.DELETED
+        return await bookmarks_service.get_bookmark_for_user_with_url_hash(session, user_key, url_hash)
-        )
+    except BookmarkNotFound as exc:
-    )
+        logger.error('Bookmark not found: %s', exc)
-    bookmark = result.first()
+        raise HTTPException(status_code=404, detail=f'Bookmark not found: {exc.message}')
-    # bookmark = session.get(Bookmark, {'url_hash': url_hash, 'userkey': user_key})
-    return bookmark
 
 
 @app.post('/api/v1/{user_key}/autocomplete_bookmark/', response_model=Bookmark)
@@ -341,24 +204,8 @@ async def autocomplete_bookmark(
     strip_params: bool = False,
 ):
     """Autofill some fields for this (new) bookmark for user `user_key`."""
-    bookmark.userkey = user_key
+    logger.info('Autocompleting bookmark %s for user %s', bookmark.url_hash, user_key)
-
+    return await bookmarks_service.autocomplete_bookmark(session, request, user_key, bookmark, strip_params)
-    # Auto-fill title, fix tags etc.
-    update_bookmark_with_info(bookmark, request, strip_params)
-
-    url_hash = generate_hash(str(bookmark.url))
-    result = await session.exec(
-        select(Bookmark).where(
-            Bookmark.userkey == user_key, Bookmark.url_hash == url_hash, Bookmark.status != Visibility.DELETED
-        )
-    )
-    bookmark_db = result.first()
-    if bookmark_db:
-        # Bookmark with this URL already exists, provide the hash so the frontend can look it up and the user can
-        # merge them if so wanted
-        bookmark.url_hash = url_hash
-
-    return bookmark
 
 
 @app.post('/api/v1/{user_key}/bookmarks/', response_model=Bookmark)
@@ -370,16 +217,8 @@ async def add_bookmark(
     strip_params: bool = False,
 ):
     """Add new bookmark for user `user_key`."""
-    bookmark.userkey = user_key
+    logger.info('Adding bookmark %s for user %s', bookmark.url, user_key)
-
+    return await bookmarks_service.add_bookmark(session, request, user_key, bookmark, strip_params)
-    # Auto-fill title, fix tags etc.
-    update_bookmark_with_info(bookmark, request, strip_params)
-    bookmark.url_hash = generate_hash(str(bookmark.url))
-
-    session.add(bookmark)
-    await session.commit()
-    await session.refresh(bookmark)
-    return bookmark
 
 
 @app.patch('/api/v1/{user_key}/bookmarks/{url_hash}', response_model=Bookmark)
@@ -392,30 +231,13 @@ async def update_bookmark(
     strip_params: bool = False,
 ):
     """Update existing bookmark `bookmark_key` for user `user_key`."""
-    result = await session.exec(
+    logger.info('Updating bookmark %s for user %s', url_hash, user_key)
-        select(Bookmark).where(
+    try:
-            Bookmark.userkey == user_key, Bookmark.url_hash == url_hash, Bookmark.status != Visibility.DELETED
+        return await bookmarks_service.update_bookmark(session, request, user_key, bookmark, url_hash, strip_params)
-        )
+    except Exception:
-    )
+        logger.exception('Failed to update bookmark %s', bookmark.id)
-    bookmark_db = result.first()
-    if not bookmark_db:
         raise HTTPException(status_code=404, detail='Bookmark not found')
 
-    bookmark.modified_date = datetime.now(UTC)
-
-    # 'patch' endpoint, which means that you can send only the data that you want to update, leaving the rest intact
-    bookmark_data = bookmark.model_dump(exclude_unset=True)
-    # Merge the changed fields into the existing object
-    bookmark_db.sqlmodel_update(bookmark_data)
-
-    # Autofill title, fix tags, etc. where (still) needed
-    update_bookmark_with_info(bookmark, request, strip_params)
-
-    session.add(bookmark_db)
-    session.commit()
-    session.refresh(bookmark_db)
-    return bookmark_db
-
 
 @app.delete('/api/v1/{user_key}/bookmarks/{url_hash}', response_model=Bookmark)
 async def delete_bookmark(
@@ -424,15 +246,13 @@ async def delete_bookmark(
     url_hash: str,
 ):
     """(Soft)Delete bookmark `bookmark_key` for user `user_key`."""
-    result = await session.get(Bookmark, {'url_hash': url_hash, 'userkey': user_key})
+    logger.info('Deleting bookmark %s for user %s', url_hash, user_key)
-    bookmark = result
+    try:
-    if not bookmark:
+        result = await bookmarks_service.delete_bookmark(session, user_key, url_hash)
+        return {'ok': True}
+    except Exception:
+        logger.exception('Failed to delete bookmark %s', url_hash)
         raise HTTPException(status_code=404, detail='Bookmark not found')
-    bookmark.deleted_date = datetime.now(UTC)
-    bookmark.status = Visibility.DELETED
-    session.add(bookmark)
-    session.commit()
-    return {'ok': True}
 
 
 @app.get('/api/v1/{user_key}/latest_changes/')
@@ -441,15 +261,16 @@ async def bookmarks_changed_since(
     user_key: str,
 ):
     """Last update on server, so the (browser) client knows whether to fetch an update."""
+    logger.info('Retrieving latest changes for user %s', user_key)
     result = await session.exec(
         select(Bookmark)
-        .where(Bookmark.userkey == user_key, Bookmark.status != Visibility.DELETED)
+        .where(Bookmark.user_key == user_key, Bookmark.status != Visibility.DELETED)
         .order_by(desc(Bookmark.modified_date))
     )
     latest_modified_bookmark = result.first()
     result = await session.exec(
         select(Bookmark)
-        .where(Bookmark.userkey == user_key, Bookmark.status != Visibility.DELETED)
+        .where(Bookmark.user_key == user_key, Bookmark.status != Visibility.DELETED)
         .order_by(desc(Bookmark.created_date))
     )
     latest_created_bookmark = result.first()
@@ -470,25 +291,18 @@ async def list_tags_for_user(
     user_key: str,
 ) -> list[str]:
     """List all tags in use by the user."""
-    result = await session.exec(
+    return await tags_service.list_tags_for_user(session, user_key)
-        select(Bookmark).where(Bookmark.userkey == user_key, Bookmark.status != Visibility.DELETED)
-    )
-    bookmarks = result.all()
-    tags = []
-    for bookmark in bookmarks:
-        tags += bookmark.tag_list
-    return clean_tags(tags)
 
 
 @app.get('/api/v1/{user_key}/tags/{tag_key}')
-async def list_tags_for_user(
+async def list_bookmarks_for_tag_for_user(
     session: SessionDep,
     user_key: str,
+    tag_key: str,
 ) -> list[str]:
     """List all tags in use by the user."""
-    result = await session.exec(select(Bookmark).where(Bookmark.userkey == user_key))
+    logger.info('List bookmarks for tag "%s" by user %s', tag_key, user_key)
-    bookmarks = result.all()
+    return await tags_service.list_bookmarks_for_tag_for_user(session, user_key, tag_key)
-    return list_tags_for_bookmarks(bookmarks)
 
 
 @app.get('/{user_key}', response_class=HTMLResponse)

src/digimarks/models.py

@@ -1,6 +1,11 @@
+"""Models for digimarks.
+
+Contains the bookmarks administration, users, tags, public tags and more.
+"""
+
 from datetime import UTC, datetime
 from http import HTTPStatus
-from typing import Optional, Type, TypeVar
+from typing import TypeVar
 
 from pydantic import AnyUrl, computed_field
 from sqlmodel import AutoString, Field, SQLModel
@@ -11,8 +16,6 @@ DEFAULT_THEME = 'freshgreen'
 class User(SQLModel, table=True):
     """User account."""
 
-    __tablename__ = 'user'
-
     id: int = Field(primary_key=True)
     username: str
     key: str
@@ -23,22 +26,23 @@ class User(SQLModel, table=True):
 class Visibility:
     """Options for visibility of an object."""
 
-    VISIBLE = 0
+    VISIBLE: int = 0
-    DELETED = 1
+    DELETED: int = 1
+    HIDDEN: int = 2
 
 
 # Type var used for building custom types for the DB
 T = TypeVar('T')
 
 
-def build_custom_type(internal_type: Type[T]) -> Type[AutoString]:
+def build_custom_type(internal_type: type[T]) -> type[AutoString]:
     """Create a type that is compatible with the database.
 
     Based on https://github.com/fastapi/sqlmodel/discussions/847
     """
 
     class CustomType(AutoString):
-        def process_bind_param(self, value, dialect) -> Optional[str]:
+        def process_bind_param(self, value, dialect) -> str | None:
             if value is None:
                 return None
 
@@ -51,7 +55,7 @@ def build_custom_type(internal_type: Type[T]) -> Type[AutoString]:
 
             return str(value)
 
-        def process_result_value(self, value, dialect) -> Optional[T]:
+        def process_result_value(self, value, dialect) -> T | None:
             if value is None:
                 return None
 
@@ -63,15 +67,13 @@ def build_custom_type(internal_type: Type[T]) -> Type[AutoString]:
 class Bookmark(SQLModel, table=True):
     """Bookmark object."""
 
-    __tablename__ = 'bookmark'
-
     id: int = Field(primary_key=True)
-    userkey: str = Field(foreign_key='user.key')
+    user_key: str = Field(foreign_key='user.key', nullable=False)
-    title: str = Field(default='')
+    title: str = Field(default='', nullable=False)
     url: AnyUrl = Field(default='', sa_type=build_custom_type(AnyUrl))
     note: str = Field(default='', nullable=True)
     # image: str = Field(default='')
-    url_hash: str = Field(default='')
+    url_hash: str = Field(default='', nullable=False)
     tags: str = Field(default='')
     starred: bool = Field(default=False)
 
@@ -87,7 +89,7 @@ class Bookmark(SQLModel, table=True):
 
     @computed_field
     @property
-    def tag_list(self) -> list:
+    def tag_list(self) -> list[str]:
         """The tags but as a proper list."""
         if self.tags:
             return self.tags.split(',')
@@ -98,10 +100,8 @@ class Bookmark(SQLModel, table=True):
 class PublicTag(SQLModel, table=True):
     """Public tag object."""
 
-    __tablename__ = 'publictag'
-
     id: int = Field(primary_key=True)
-    tagkey: str
+    tag_key: str
-    userkey: str = Field(foreign_key='user.key')
+    user_key: str = Field(foreign_key='user.key')
     tag: str
     created_date: datetime = Field(default=datetime.now(UTC))

src/digimarks/static/css/digimarks.css

@@ -22,4 +22,12 @@
 .thumbnail img {
     /*width: 72px;*/
     width: 60px;
-}
+}
+
+#bookmarkEditForm fieldset {
+    border: none;
+}
+
+#bookmarkEditForm fieldset input, #bookmarkEditForm textarea, #bookmarkEditForm select, #bookmarkEditForm label {
+    width: 100%;
+}

src/digimarks/static/css/digui.css

@@ -30,6 +30,7 @@
     --border-color: #d5d9d9;
     --border-width: 1px;
     --border-radius: 8px;
+    --chip-border-radius: 2rem;
     --shadow-color: rgba(213, 217, 217, .5);
     --global-theme-toggle-content: ' 🌞';
 
@@ -77,6 +78,7 @@ html[data-theme='nebula-dark'] {
     --border-color: #333;
     --border-width: 1px;
     --border-radius: 8px;
+    --chip-border-radius: 2rem;
     --shadow-color: rgba(3, 3, 3, .5);
     --global-theme-toggle-content: ' 🌝';
 }
@@ -99,6 +101,7 @@ html[data-theme='bbs'] {
     --border-color: #333;
     --border-width: 2px;
     --border-radius: 0;
+    --chip-border-radius: 0;
     --global-theme-toggle-content: ' 🖥️';
 }
 
@@ -124,6 +127,7 @@ html[data-theme='silo'] {
     /*--border-color: #003eaa;*/
     --border-width: 2px;
     --border-radius: 0;
+    --chip-border-radius: 0;
     --global-theme-toggle-content: ' ⌨️';
 }
 
@@ -229,6 +233,7 @@ ol li::marker, ul li::marker {
 .active {
     background-color: var(--color-highlight);
     color: var(--text-color);
+    transition-duration: 0.2s;
 }
 
 /* Special button */
@@ -254,6 +259,7 @@ button, .button, input, select, textarea {
     -webkit-user-select: none;
     touch-action: manipulation;
     vertical-align: middle;
+    transition-duration: 0.2s;
 }
 
 button, .button, input, select, textarea, table {
@@ -267,6 +273,7 @@ button:hover, .button:hover {
     /*background-color: #d57803;*/
     background-color: var(--color-highlight);
     filter: brightness(80%);
+    transition-duration: 0.2s;
 }
 
 button:focus, .button:focus {
@@ -303,6 +310,22 @@ button:focus, .button:focus {
     filter: brightness(80%);
 }
 
+/* Toggle buttons */
+
+.button-group {
+    display: inline-flex;
+    overflow: hidden;
+    border: var(--border-width) solid var(--border-color);
+    border-radius: var(--border-radius);
+}
+
+.button-group button {
+    /* Reset borders because the buttons are mashed together and the group has its own border */
+    border: none;
+    border-radius: 0;
+    box-shadow: none !important;
+}
+
 /* Table */
 
 th {
@@ -334,6 +357,7 @@ th, td {
 [data-theme='nebula'] .card,
 [data-theme='nebula'] button,
 [data-theme='nebula'] .button,
+[data-theme='nebula'] .button-group,
 [data-theme='nebula'] input,
 [data-theme='nebula'] select,
 [data-theme='nebula'] textarea,
@@ -342,6 +366,7 @@ th, td {
 [data-theme='nebula-dark'] .card,
 [data-theme='nebula-dark'] button,
 [data-theme='nebula-dark'] .button,
+[data-theme='nebula-dark'] .button-group,
 [data-theme='nebula-dark'] input,
 [data-theme='nebula-dark'] select,
 [data-theme='nebula-dark'] textarea,
@@ -419,7 +444,7 @@ th, td {
 
 .chip {
     font-size: .8rem;
-    border-radius: var(--border-radius);
+    border-radius: var(--chip-border-radius);
     background-color: var(--background-color-secondary);
     color: var(--text-color-secondary);
     /*color: var(--text-color);*/
@@ -428,7 +453,7 @@ th, td {
 }
 
 .chip .button {
-    border-radius: var(--border-radius);
+    border-radius: var(--chip-border-radius);
 }
 
 /* Status */

src/digimarks/static/js/digimarks.js

@@ -16,7 +16,9 @@ document.addEventListener('alpine:init', () => {
         showBookmarksCards: Alpine.$persist(false).as('showBookmarksCards'),
         showTags: Alpine.$persist(false).as('showTags'),
         /* Bookmark that is being edited, used to fill the form, etc. */
-        bookmarkToEdit: Alpine.$persist(null).as('bookmarkToEdit'),
+        bookmarkToEdit: Alpine.$persist({}).as('bookmarkToEdit'),
+        bookmarkToEditError: null,
+        bookmarkToEditVisible: false,
 
         /* Loading indicator */
         loading: false,
@@ -38,6 +40,9 @@ document.addEventListener('alpine:init', () => {
             /** Initialise the application after loading */
             document.documentElement.setAttribute('data-theme', this.theme);
             console.log('Set theme', this.theme);
+
+            /* Make sure the edit/add bookmark form has a fresh empty object */
+            this.resetEditBookmark();
             /* Bookmarks are refreshed through the getBookmarks() call in the HTML page */
             /* await this.getBookmarks(); */
             setInterval(() => {
@@ -143,6 +148,10 @@ document.addEventListener('alpine:init', () => {
             )
         },
         get filteredTags() {
+            if (this.cache[this.userKey].tags === undefined) {
+                console.log('Tags not yet cached');
+                return [];
+            }
             /* Search in the list of all tags */
             return this.cache[this.userKey].tags.filter(
                 i => i.match(new RegExp(this.search, "i"))
@@ -203,18 +212,53 @@ document.addEventListener('alpine:init', () => {
             this.showBookmarksCards = !this.showBookmarksList;
         },
 
+        resetEditBookmark() {
+            this.bookmarkToEdit = {
+                'url': '',
+                'title': '',
+                'note': '',
+                'tags': ''
+            }
+        },
         async startAddingBookmark() {
             /* Open 'add bookmark' page */
             console.log('Start adding bookmark');
-            this.bookmarkToEdit = {
+            this.resetEditBookmark();
-                'url': ''
-            }
             // this.show_bookmark_details = true;
             const editFormDialog = document.getElementById("editFormDialog");
+            this.bookmarkToEditVisible = true;
             editFormDialog.showModal();
         },
+        async bookmarkURLChanged() {
+            console.log('Bookmark URL changed');
+            // let response = await fetch('/api/v1/' + this.userKey + '/autocomplete_bookmark/');
+            try {
+                const response = await fetch('/api/v1/' + this.userKey + '/autocomplete_bookmark/', {
+                    method: 'POST',
+                    headers: {
+                        'Content-Type': 'application/json'
+                    },
+                    body: JSON.stringify({
+                        // Bookmark form data
+                        url: this.bookmarkToEdit.url,
+                        title: this.bookmarkToEdit.title,
+                        note: this.bookmarkToEdit.note,
+                        tags: this.bookmarkToEdit.tags
+                    })
+                });
+                const data = await response.json();
+                // TODO: update form fields if needed (auto-fetched title for example
+                console.log(data);
+                this.bookmarkToEditError = 'lolwut';
+            } catch (error) {
+                // enter your logic for when there is an error (ex. error toast)
+
+                console.log(error)
+            }
+        },
         async saveBookmark() {
             console.log('Saving bookmark');
+            // this.bookmarkToEditVisible = false;
             // this.show_bookmark_details = false;
         },
         async addBookmark() {

src/digimarks/tags_service.py

@@ -0,0 +1,102 @@
+"""Helper functions for tags used with Bookmark models."""
+
+from sqlalchemy import Sequence
+from sqlmodel import select
+
+from digimarks.models import Bookmark, Visibility
+
+
+def i_filter_false(predicate, iterable):
+    """Filter an iterable if predicate returns True.
+
+    i_filter_false(lambda x: x%2, range(10)) --> 0 2 4 6 8
+    """
+    if predicate is None:
+        predicate = bool
+    for x in iterable:
+        if not predicate(x):
+            yield x
+
+
+def unique_ever_seen(iterable, key=None):
+    """List unique elements, preserving order. Remember all elements ever seen.
+
+    unique_ever_seen('AAAABBBCCDAABBB') --> A B C D
+    unique_ever_seen('ABBCcAD', str.lower) --> A B C D
+    """
+    seen = set()
+    seen_add = seen.add
+    if key is None:
+        for element in i_filter_false(seen.__contains__, iterable):
+            seen_add(element)
+            yield element
+    else:
+        for element in iterable:
+            k = key(element)
+            if k not in seen:
+                seen_add(k)
+                yield element
+
+
+def clean_tags(tags_list: list) -> list[str]:
+    """Generate a unique list of the tags.
+
+    :param list tags_list: List with all tags
+    :return: deduplicated list of the tags, without leading or trailing whitespace
+    :rtype: list
+    """
+    tags_res = [x.strip() for x in tags_list]
+    tags_res = list(unique_ever_seen(tags_res))
+    tags_res.sort()
+    if tags_res and tags_res[0] == '':
+        del tags_res[0]
+    return tags_res
+
+
+def list_tags_for_bookmarks(bookmarks: Sequence[Bookmark]) -> list[str]:
+    """Generate a unique list of the tags from the list of bookmarks.
+
+    :param Sequence[Bookmark] bookmarks: List of bookmarks to create the list of tags from
+    """
+    tags = []
+    for bookmark in bookmarks:
+        tags += bookmark.tag_list
+    return clean_tags(tags)
+
+
+def set_tags(bookmark: Bookmark, new_tags: str) -> None:
+    """Set tags from `tags`, strip and sort them.
+
+    :param Bookmark bookmark: Bookmark to modify
+    :param str new_tags: New tags to sort and set.
+    """
+    tags_split = new_tags.split(',')
+    tags_clean = clean_tags(tags_split)
+    bookmark.tags = ','.join(tags_clean)
+
+
+async def list_tags_for_user(
+    session,
+    user_key: str,
+) -> list[str]:
+    """List all tags in use by the user."""
+    result = await session.exec(
+        select(Bookmark).where(Bookmark.user_key == user_key, Bookmark.status != Visibility.DELETED)
+    )
+    bookmarks = result.all()
+    tags = []
+    for bookmark in bookmarks:
+        tags += bookmark.tag_list
+    return clean_tags(tags)
+
+
+async def list_bookmarks_for_tag_for_user(
+    session,
+    user_key: str,
+    tag_key: str,
+) -> list[str]:
+    """List all tags in use by the user."""
+    result = await session.exec(select(Bookmark).where(Bookmark.user_key == user_key))
+    # TODO: filter on tag_key
+    bookmarks = result.all()
+    return list_tags_for_bookmarks(bookmarks)

src/digimarks/templates/user_index.html

@@ -11,9 +11,14 @@
                 <ul>
                     <li><h1>digimarks</h1></li>
                     <li>
-                        <button x-data @click="$store.digimarks.toggleTagPage()"
+                        <div class="button-group">
-                                :class="$store.digimarks.showTags && 'active'">tags
+                            <button x-data @click="$store.digimarks.toggleTagPage()"
-                        </button>
+                                    :class="!$store.digimarks.showTags && 'active'">bookmarks
+                            </button>
+                            <button x-data @click="$store.digimarks.toggleTagPage()"
+                                    :class="$store.digimarks.showTags && 'active'">tags
+                            </button>
+                        </div>
                     </li>
                     <li>
                         <button @click="$store.digimarks.startAddingBookmark()">add bookmark</button>
@@ -32,6 +37,7 @@
                 <h1 x-bind:title="$store.digimarks.userKey">Bookmarks</h1>
 
                 <p>
+                <div class="button-group">
                     <button @click="$store.digimarks.sortAlphabetically()"
                             :class="$store.digimarks.sortTitleAsc && 'active'">a-z &darr;
                     </button>
@@ -44,9 +50,15 @@
                     <button @click="$store.digimarks.sortCreated('desc')"
                             :class="$store.digimarks.sortCreatedDesc && 'active'">date &uarr;
                     </button>
+                </div>
+                <div class="button-group">
                     <button @click="$store.digimarks.toggleListOrGrid()"
-                            :class="$store.digimarks.showBookmarksCards && 'active'">list or grid
+                            :class="$store.digimarks.showBookmarksCards && 'active'">grid
                     </button>
+                    <button @click="$store.digimarks.toggleListOrGrid()"
+                            :class="!$store.digimarks.showBookmarksCards && 'active'">list
+                    </button>
+                </div>
                 </p>
 
                 <table x-cloak x-show="$store.digimarks.showBookmarksList">
@@ -98,15 +110,18 @@
                                 <div class="card-thumb" x-show="bookmark.favicon"><img
                                         x-bind:src="'/content/favicons/' + bookmark.favicon"></div>
                                 <div class="statuses">
-                                    <div x-show="bookmark.starred" class="star"><i class="fa-fw fa-solid fa-star"></i>
+                                    <div x-show="bookmark.starred" class="star"><i
+                                            class="fa-fw fa-solid fa-star"></i>
                                     </div>
                                     <div x-show="bookmark.http_status !== 200 && bookmark.http_status !== 304"
                                          class="error"><i
                                             class="fa-fw fa-solid fa-triangle-exclamation"></i>
                                     </div>
-                                    <div x-show="bookmark.note"><i class="fa-fw fa-regular fa-note-sticky"></i></div>
+                                    <div x-show="bookmark.note"><i class="fa-fw fa-regular fa-note-sticky"></i>
+                                    </div>
+                                </div>
+                                <div><a x-text="bookmark.title" x-bind:href="bookmark.url" target="_blank"></a>
                                 </div>
-                                <div><a x-text="bookmark.title" x-bind:href="bookmark.url" target="_blank"></a></div>
                             </div>
                             <div class="card-footer">
                                 <button title="show actions"><i class="fa-solid fa-square-caret-down"></i></button>
@@ -170,19 +185,46 @@
             </span>
                 </div>
 #}
-                <form method="dialog">
+                <template x-if="$store.digimarks.bookmarkToEditVisible">
-                    <input type="text" name="">
+                    <form method="dialog" id="bookmarkEditForm">
-                    <p>
+                        <fieldset class="form-group">
-                        <label>
+                            <label for="bookmark_url">URL</label>
-                            <input type="checkbox" name="strip" id="strip"/>
+                            <input id="bookmark_url" type="text" name="bookmark_url" placeholder="url"
-                            <span>Strip parameters from url (like <em>?utm_source=social</em> - can break the link!)</span>
+                                   x-on:change.debounce="$store.digimarks.bookmarkURLChanged()"
-                        </label>
+                                   x-model="$store.digimarks.bookmarkToEdit.url">
-                    </p>
+                        </fieldset>
-                    <div>
+                        <fieldset class="form-group">
-                        <button value="cancel">Cancel</button>
+                            <label for="bookmark_title">Title</label>
-                        <button @click="$store.digimarks.saveBookmark()">Save</button>
+                            <input id="bookmark_title" type="text" name="bookmark_title"
-                    </div>
+                                   placeholder="title (leave empty for autofetch)"
-                </form>
+                                   x-model="$store.digimarks.bookmarkToEdit.title">
+                        </fieldset>
+                        <fieldset class="form-group">
+                            <label for="bookmark_note">Note</label>
+                            <textarea id="bookmark_note" type="text" name="bookmark_note"
+                                      x-model="$store.digimarks.bookmarkToEdit.note">
+                        </textarea>
+                        </fieldset>
+                        <fieldset class="form-group">
+                            <label for="bookmark_tags">Tags</label>
+                            <input id="bookmark_tags" type="text" name="bookmark_tags"
+                                   placeholder="tags, divided bij comma's"
+                                   x-model="$store.digimarks.bookmarkToEdit.tags">
+                        </fieldset>
+                        <p x-show="$store.digimarks.bookmarkToEditError"
+                           x-data="$store.digimarks.bookmarkToEditError"></p>
+                        <p>
+                            <label>
+                                <input type="checkbox" name="strip" id="strip"/>
+                                <span>Strip parameters from url (like <em>?utm_source=social</em> - can break the link!)</span>
+                            </label>
+                        </p>
+                        <div>
+                            <button value="cancel">Cancel</button>
+                            <button @click="$store.digimarks.saveBookmark()">Save</button>
+                        </div>
+                    </form>
+                </template>
             </dialog>
         </main>
 

src/digimarks/utils.py

@@ -0,0 +1,15 @@
+"""General utility functions."""
+
+import binascii
+import hashlib
+import os
+
+
+def generate_hash(input_text: str) -> str:
+    """Generate a hash from string `input`, e.g., for a URL."""
+    return hashlib.md5(input_text.encode('utf-8')).hexdigest()
+
+
+def generate_key() -> str:
+    """Generate a key to be used for a user or tag."""
+    return str(binascii.hexlify(os.urandom(24)))